Illness and Disease - I - Guide to Services

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Illness and Disease
Illness and Disease
Illness and Disease (ascending)	Reference Diagnostic Test	Pathogen	Laboratory

Infection or colonization	Whole genome Sequencing (WGS)**Review patient criteria	Candida auris	Antimicrobial Resistance and Nosocomial Infections
Influenza	Oseltamivir Susceptibility Testing by NA Star and/or Sequencing	Influenza virus	Influenza, Respiratory Viruses and Coronaviruses
Influenza	Amantadine Susceptibility Testing by Sequencing	Influenza A virus	Influenza, Respiratory Viruses and Coronaviruses
Influenza	Genotyping by RT-PCR	Influenza virus	Influenza, Respiratory Viruses and Coronaviruses
Influenza	Molecular Detection by PCR or RT-PCR	Zoonotic Influenza virus	Influenza, Respiratory Viruses and Coronaviruses
Influenza	Zanamivir Susceptibility Testing by NA Star and/or Sequencing	Influenza virus	Influenza, Respiratory Viruses and Coronaviruses
Influenza	Hemagglutination Inhibition (HAI) assay	Influenza virus	Influenza, Respiratory Viruses and Coronaviruses
Inner ear infections	Serotyping	Haemophilus influenzae	Syphilis Diagnostics and Vaccine Preventable Bacterial Diseases
Inner ear infections	Antimicrobial Susceptibility Testing	Haemophilus influenzae	Syphilis Diagnostics and Vaccine Preventable Bacterial Diseases
Inner ear infections	Biochemical Identification and Biotyping	Haemophilus influenzae	Syphilis Diagnostics and Vaccine Preventable Bacterial Diseases
Inner ear infections	Multi-Locus Sequence Typing (MLST)	Haemophilus influenzae	Syphilis Diagnostics and Vaccine Preventable Bacterial Diseases
Inner ear infections	Molecular Detection by Real Time PCR	Haemophilus influenzae	Syphilis Diagnostics and Vaccine Preventable Bacterial Diseases
Invasive Group A Streptococcal Disease	Determination of emm type for Streptococcus pyogenes by PCR	Streptococcus pyogenes	Streptococcus and STI Section
Invasive Group A Streptococcal Disease	Antimicrobial Susceptibility Testing	Streptococcus pyogenes	Streptococcus and STI Section