Guidelines
Anaplasma phagocytophilum
Andes virus
Bacillus anthracis
Bordetella pertussis
Borrelia afzelii
Borrelia burgdorferi sensu lato
Borrelia burgdorferi sensu stricto
Borrelia garinii
Brucella spp.
Bundibugyo Virus
Campylobacter spp.
Chapare virus
Chikungunya virus (CHIKV)
Chlamydia trachomatis - Lymphogranuloma venereum (LGV)
Clostridioides difficile
Clostridium botulinum
Corynebacterium diphtheriae
Corynebacterium diphtheriae species complex
Corynebacterium pseudotuberculosis
Corynebacterium ulcerans
Crimean-Congo hemorrhagic fever (CCHF) virus
Cutaneous Human Papilloma virus (HPV)
Dengue virus
Ebola virus
Enterobacteriaceae, Various Gram Negative
Enteroviruses
Escherichia coli
Escherichia coli O157:H7
Francisella tularensis
Gram negative organisms
Guanarito virus
Haemophilus ducreyi
Haemophilus influenzae
Hantaan virus
Hepatitis A virus (HAV)
Hepatitis B virus (HBV)
Hepatitis C virus (HCV)
Hepatitis Delta virus (HDV)
Hepatitis E virus (HEV)
Human immunodeficiency virus (HIV)
- Biosafety Directive for Human Immunodeficiency Virus (HIV) and Human T-cell Lymphotropic Virus Type 1 (HTLV-1)
- Canadian Guidelines on Sexually Transmitted and Blood-Borne Infections
- HIV and AIDS: For health professionals
- Human Immunodeficiency Virus - HIV Screening and Testing Guide
- National case definition: Acquired immune deficiency syndrome (AIDS)
- National case definition: Human immunodeficiency virus (HIV)
Human T-lymphotropic virus (HTLV)
Influenza A virus
- Canadian Pandemic Influenza Preparedness: Planning Guidance for the Health Sector
- Flu (influenza): For health professionals
- Laboratory-confirmed influenza (including novel influenza subtypes)
- Protocol for Microbiological Investigations of Severe Acute Respiratory Infections (SARI)
- Severe Acute Respiratory Infection (SARI) Case Definition
Influenza C virus
- Canadian Pandemic Influenza Preparedness: Planning Guidance for the Health Sector
- Flu (influenza): For health professionals
- Laboratory-confirmed influenza (including novel influenza subtypes)
- Protocol for Microbiological Investigations of Severe Acute Respiratory Infections (SARI)
- Severe Acute Respiratory Infection (SARI) Case Definition
Influenza virus
- Canadian Pandemic Influenza Preparedness: Planning Guidance for the Health Sector
- Flu (influenza): For health professionals
- For health professionals: Avian influenza (H5N1)
- For health professionals: Avian influenza A(H7N9)
- Laboratory-confirmed influenza (including novel influenza subtypes)
- Protocol for Microbiological Investigations of Severe Acute Respiratory Infections (SARI)
- Severe Acute Respiratory Infection (SARI) Case Definition
Jamestown Canyon virus
Japanese Encephalitis virus (JE)
Junin virus
Lassa virus
Legionella pneumophila
Legionella spp.
Listeria monocytogenes
Listeria spp.
Machupo virus
Marburg virus
Measles virus
Middle East respiratory syndrome coronavirus (MERS-CoV)
- For health professionals: Middle East respiratory syndrome (MERS)
- National Case Definition:Middle East Respiratory Syndrome Coronavirus (MERS-CoV)
- National Surveillance Guidelines for Human Infection with Middle East Respiratory Syndrome Coronavirus (MERS-CoV)
- Protocol for Microbiological Investigations of Severe Acute Respiratory Infections (SARI)
- Severe Acute Respiratory Infection (SARI) Case Definition
Monkeypox
Mucosal Human Papilloma virus (HPV)
Mumps virus
Mycobacterium leprae
Mycobacterium spp.
- Canadian Public Health Laboratory Network (CPHLN) Device Testing Recommendations regarding Non-Tuberculous Mycobacteria (NTM) Contamination in Heater-Cooler Units
- Case Definitions for Communicable Diseases under National Surveillance - 2009 - Leprosy
- Interim laboratory testing guidance for the detection of non-tuberculous Mycobacterium(NTM) infections in post-operative patients exposed to heater-cooler units
Mycobacterium tuberculosis
Mycobacterium tuberculosis complex and non-tuberculous mycobacteria
- Canadian Public Health Laboratory Network (CPHLN) Device Testing Recommendations regarding Non-Tuberculous Mycobacteria (NTM) Contamination in Heater-Cooler Units
- Case Definitions for Communicable Diseases under National Surveillance - 2009 - Leprosy
- Interim laboratory testing guidance for the detection of non-tuberculous Mycobacterium(NTM) infections in post-operative patients exposed to heater-cooler units
- National case definition: Tuberculosis
- Tuberculosis: For health professionals
Mycoplasma genitalium
Neisseria gonorrhoeae
Neisseria meningitidis
Nipah virus
Norovirus
Omsk hemorrhagic fever virus
Poliovirus serotypes 1-3
Puumula virus
Rabies virus
Rift Valley Fever (RVF) virus
Rubella virus
Sabia virus
Salmonella spp.
SARS-CoV-2
- Coronavirus disease (COVID-19): For health professionals
- COVID-19 signs, symptoms and severity of disease: A clinician guide
- Interim national case definition: Coronavirus disease (COVID-19)
- National surveillance for Coronavirus disease (COVID-19)
- Protocol for Microbiological Investigations of Severe Acute Respiratory Infections (SARI)
- Severe Acute Respiratory Infection (SARI) Case Definition
Seoul virus
Severe acute respiratory syndrome associated coronavirus (SARS-CoV)
Shigella spp.
Sin Nombre virus
Snowshoe hare virus
Streptococcus agalactiae
Streptococcus pneumoniae
Streptococcus pyogenes
Sudan Virus
Tai Forest virus
Tick-borne encephalitis virus
Treponema pallidum subspecies pallidum
- Canadian Guidelines on Sexually Transmitted Infections
- Canadian Public Health Laboratory Network laboratory guidelines for congenital syphilis and syphilis screening in pregnant women in Canada
- Canadian Public Health Laboratory Network laboratory guidelines for the diagnosis of neurosyphilis in Canada
- Canadian Public Health Laboratory Network laboratory guidelines for the use of direct tests to detect syphilis in Canada
- Canadian Public Health Laboratory Network laboratory guidelines for the use of point-of-care tests for the diagnosis of syphilis in Canada
- Canadian Public Health Laboratory Network laboratory guidelines for the use of serological tests (excluding point-of-care tests) for the diagnosis of syphilis in Canada
- Canadian Public Health Laboratory Network national syphilis laboratory testing recommendations: INTRODUCTION
- National Case Definition : Syphilis
Varicella-Zoster virus (VZV)
Variola virus
Vibrio cholerae
Vibrio spp.
West Nile virus (WNV)
Yellow Fever virus (YF)
Yersinia pestis
Zika virus
Zoonotic Influenza virus
- Canadian Pandemic Influenza Preparedness: Planning Guidance for the Health Sector
- For health professionals: Avian influenza (H5N1)
- For health professionals: Avian influenza A(H7N9)
- Laboratory-confirmed influenza (including novel influenza subtypes)
- Protocol for Microbiological Investigations of Severe Acute Respiratory Infections (SARI)
- Severe Acute Respiratory Infection (SARI) Case Definition